timedelay.lm.batch: time delay linear model batch

In GeneReg: Construct time delay gene regulatory network

Description

Batch usage of time delay linear model.

Usage

timedelay.lm.batch(bspline.data, expr.data, regulator.list, 
target.list=rownames(bspline.data), ...)

Arguments

bspline.data	output of ts.bspline, an interpolated expression matrix with genes in the rows, predicted time points in the columns
expr.data	an observed expression matrix with genes in the rows, predicted time points in the columns
regulator.list	a candidate pool of potential regulators
target.list	the list of target genes that will be investigated
...	Additional arguments, passed to timedelay.lm

References

Tao Huang, Lei Liu, Ziliang Qian, Kang Tu, Yixue Li, Lu Xie: Using GeneReg to construct time delay gene regulatory networks. BMC Res Notes 2010, 3(1):142. http://www.biomedcentral.com/1756-0500/3/142

GeneReg documentation built on May 30, 2017, 6:07 a.m.