API for HMPTrees
Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
| Global functions | |
|---|---|
| HMPTrees | Man page |
| HMPTrees-internal | Man page |
| HMPTrees-package | Man page |
| buildTree | Man page Source code |
| checkTreeValidHelp | Man page Source code |
| checkTreeValidity | Man page Source code |
| compareTwoDataSets | Man page Source code |
| createAndPlot | Man page Source code |
| createTrees | Man page Source code |
| displayLegend | Man page Source code |
| formatData | Man page Source code |
| generateTree | Man page Source code |
| getBranchSizes | Man page Source code |
| getMLEandLoglike | Man page Source code |
| getTaxaDepth | Man page Source code |
| mergeDataSets | Man page Source code |
| pairedCompareTwoDataSets | Man page Source code |
| plotTree | Man page Source code |
| plotTreeDataMDS | Man page Source code |
| removeUnclass | Man page Source code |
| saliva | Man page |
| stool | Man page |
| subsetData | Man page Source code |
| throat | Man page |
| transformHMPTreetoHMP | Man page Source code |
| transformHMPtoHMPTree | Man page Source code |
| traverseTree | Man page Source code |
| traverseTreeHelp | Man page Source code |
| trimToTaxaLevel | Man page Source code |
