throat: Throat Data Set
In HMPTrees: Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
Description
A data set containing all taxa from 22 subjects.
Usage
1
Format
The format is a data frame of 529 rows by 22 columns, with each column being a separate subject and each
row being a different taxa denoted by the row names. The taxanomical levels are separated by a '.' in
their names (Bacteria.Phylum.Class....). The values in each column are the sum of values that each taxa
had in an RDP file. It should also be noted that the samples have not been normalized and should be
used with 'formatData'. Also any level that ends with a U was unclassified in the RDP file.
HMPTrees documentation built on May 2, 2019, 4:02 p.m.
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Description
A data set containing all taxa from 22 subjects.
Usage
1 |
Format
The format is a data frame of 529 rows by 22 columns, with each column being a separate subject and each row being a different taxa denoted by the row names. The taxanomical levels are separated by a '.' in their names (Bacteria.Phylum.Class....). The values in each column are the sum of values that each taxa had in an RDP file. It should also be noted that the samples have not been normalized and should be used with 'formatData'. Also any level that ends with a U was unclassified in the RDP file.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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