Files in HMPTrees
Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
MD5
NEWS
DESCRIPTION
NAMESPACE
inst/doc/Creating-Data-From-RDP-Tutorial.Rnw
inst/doc/Creating-Data-From-RDP-Tutorial.pdf
vignettes/Creating-Data-From-RDP-Tutorial.Rnw
R/createAndPlot.R
R/getMLEandLoglike.R
R/compareTwoDataSets.R
R/traverseTreeHelp.R
R/plotTree.R
R/plotTreeDataMDS.R
R/createTrees.R
R/formatData.R
R/buildTree.R
R/checkTreeValidHelp.R
R/getBranchSizes.R
R/transformHMPtoHMPTree.R
R/checkTreeValidity.R
R/transformHMPTreetoHMP.R
R/removeUnclass.R
R/generateTree.R
R/getTaxaDepth.R
R/pairedCompareTwoDataSets.R
R/displayLegend.R
R/mergeDataSets.R
R/traverseTree.R
R/trimToTaxaLevel.R
R/subsetData.R
man/createAndPlot.Rd
man/checkTreeValidity.Rd
man/formatData.Rd
man/HMPTrees-package.Rd
man/getMLEandLoglike.Rd
man/compareTwoDataSets.Rd
man/generateTree.Rd
man/displayLegend.Rd
man/plotTree.Rd
man/throat.Rd
man/mergeDataSets.Rd
man/stool.Rd
man/saliva.Rd
man/HMPTrees-internal.Rd
man/plotTreeDataMDS.Rd
man/trimToTaxaLevel.Rd
man/createTrees.Rd
man/pairedCompareTwoDataSets.Rd
build/vignette.rds
data/saliva.rda
data/stool.rda
data/throat.rda
