Contains tools for exploring HardyWeinberg equilibrium for diallelic genetic marker data. All classical tests (chisquare, exact, likelihoodratio and permutation tests) for HardyWeinberg equilibrium are included in the package, as well as functions for power computation and for the simulation of marker data under equilibrium and disequilibrium. Routines for dealing with markers on the Xchromosome are included. Functions for testing equilibrium in the presence of missing data by using multiple imputation are also provided. Implements several graphics for exploring the equilibrium status of a large set of diallelic markers: ternary plots with acceptance regions, logratio plots and QQ plots.
Package details 


Author  Jan Graffelman <jan.graffelman@upc.edu> 
Date of publication  20170517 07:18:25 UTC 
Maintainer  Jan Graffelman <jan.graffelman@upc.edu> 
License  GPL (>= 2) 
Version  1.5.8 
URL  https://www.rproject.org http://wwweio.upc.edu/~jan 
Package repository  View on CRAN 
Installation 
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