dgraffelmanweir.bi: Calculate Graffelman-Weir exact density for bi-allelic...
In HardyWeinberg: Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
View source: R/dgraffelmanweir.bi.R
dgraffelmanweir.bi R Documentation
Calculate Graffelman-Weir exact density for bi-allelic X-chromosomal variant
Description
Function dgraffelmanweir calculate the probability P(NAB=nab and
MA=ma|NA=na) for a bi-allelic X-chromosomal variant.
Usage
dgraffelmanweir.bi(x, y)
Arguments
x
vector with male genotype counts (A,B)
y
vector with female genotype counts (AA,AB,BB)
Value
a single real number
Author(s)
Jan Graffelman jan.graffelman@upc.edu
References
Graffelman, J. and Weir, B.S. (2016) Testing for Hardy-Weinberg
equilibrium at bi-allelic genetic markers on the X chromosome.
Heredity 116(6) pp. 558–568. \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1038/hdy.2016.20")}
See Also
HWExact, HWExactStats
Examples
males <- c(A=392, B=212)
females <- c(AA=275, AB=296, BB=80)
prob <- dgraffelmanweir.bi(males,females)
print(prob)
HardyWeinberg documentation built on May 29, 2024, 6:17 a.m.
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View source: R/dgraffelmanweir.bi.R
| dgraffelmanweir.bi | R Documentation |
Calculate Graffelman-Weir exact density for bi-allelic X-chromosomal variant
Description
Function dgraffelmanweir calculate the probability P(NAB=nab and
MA=ma|NA=na) for a bi-allelic X-chromosomal variant.
Usage
dgraffelmanweir.bi(x, y)Arguments
x |
vector with male genotype counts (A,B) |
y |
vector with female genotype counts (AA,AB,BB) |
Value
a single real number
Author(s)
Jan Graffelman jan.graffelman@upc.edu
References
Graffelman, J. and Weir, B.S. (2016) Testing for Hardy-Weinberg equilibrium at bi-allelic genetic markers on the X chromosome. Heredity 116(6) pp. 558–568. \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1038/hdy.2016.20")}
See Also
HWExact, HWExactStats
Examples
males <- c(A=392, B=212)
females <- c(AA=275, AB=296, BB=80)
prob <- dgraffelmanweir.bi(males,females)
print(prob)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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