HiCglmi: Probing Factor-Dependent Long-Range Contacts using Regression with Higher-Order Interaction Terms

We propose a generalized linear regression with higher-order interaction terms to assess the influences of genomic features such as DNA-binding proteins and functional elements on long-range contacts from Hi-C experiments.

Install the latest version of this package by entering the following in R:
install.packages("HiCglmi")
AuthorRaphael Mourad
Date of publication2016-10-17 18:59:53
MaintainerRaphael Mourad <raphael.mourad@ibcg.biotoul.fr>
LicenseGPL-2
Version1.0

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