Description Usage Arguments Value Author(s)
View source: R/HiCglmiMiscFun.R
Function to check the log-log linear relation between distance and Hi-C count. At a particular distance range, the log-log function should be linear. The generalized linear regression with interactions (GLMI) can be used only if this log-log linear relation holds. One could consider the log-log linear relation holds if R2>0.95.
1 | testDistancePowerLawDistrib(HTCL, distInter)
|
HTCL |
A HTClist object (HiTC R package). |
distInter |
Optional. A vector of two numerical values to set a distance range for Hi-C analysis. |
A list containing the log-log regression information.
Raphael Mourad
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