annotateHiCBin: Annotate Hi-C bins with genomic feature data.
In HiCglmi: Probing Factor-Dependent Long-Range Contacts using Regression with Higher-Order Interaction Terms
Description
Usage
Arguments
Value
Author(s)
View source: R/HiCglmiMiscFun.R
Description
This is an internal function. Function to compute the average value of a genomic feature over a set of non-overlapping bins (Hi-C bins). Genomic features can be ChIP-seq peak intervals.
Usage
1
annotateHiCBin(HiC_bin.GR, GenomicFeature.GR)
Arguments
HiC_bin.GR
A GRanges object containing the Hi-C bins.
GenomicFeature.GR
A GRanges object containing the genomic feature intervals.
Value
A vector object is returned.
Author(s)
Raphael Mourad
HiCglmi documentation built on Aug. 20, 2019, 1:04 a.m.
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Description Usage Arguments Value Author(s)
View source: R/HiCglmiMiscFun.R
Description
This is an internal function. Function to compute the average value of a genomic feature over a set of non-overlapping bins (Hi-C bins). Genomic features can be ChIP-seq peak intervals.
Usage
1 | annotateHiCBin(HiC_bin.GR, GenomicFeature.GR)
|
Arguments
HiC_bin.GR |
A GRanges object containing the Hi-C bins. |
GenomicFeature.GR |
A GRanges object containing the genomic feature intervals. |
Value
A vector object is returned.
Author(s)
Raphael Mourad
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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