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LDtests: Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium
Exact tests for Linkage Disequilibrium (LD) and Hardy-Weinberg Equilibrium (HWE). - 2-sided LD tests based on different measures of LD (Kulinskaya and Lewin 2008) - 1-sided Fisher's exact test for LD - 2-sided Haldane test for HWE (Wiggington 2005) - 1-sided test for inbreeding - conditional p-values proposed in Kulinskaya (2008) to overcome the problems of asymetric distributions (for both LD and HWE)
Getting started
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Package details |
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| Author | Alex Lewin |
| Maintainer | Alex Lewin <a.m.lewin@imperial.ac.uk> |
| License | GPL |
| Version | 1.0 |
| Package repository | View on CRAN |
| Installation |
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