HWE2sided.table: Table and plot of Hardy-Weinberg p-values for all 2x2 tables...
In LDtests: Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium
Description
Usage
Arguments
Value
Author(s)
References
See Also
Examples
Description
Table and plot of HWE p-values for all possible contingency tables consistent with the margins of the input observed contingency table. See HWE2sided for details of the p-values calculated.
Usage
1
HWE2sided.table(maf, n, ylim = c(0, 1), xlim = NULL)
Arguments
maf
Minor allele frequency
n
Total genotype count
ylim
Y-axis range for plot
xlim
X-axis range for plot
Value
Outputs the table of HWE p-values for all the contingency tables consistent with the margins of the input table.
Author(s)
Alex Lewin
References
Kulinskaya and Lewin 2008
See Also
Examples
1
2
3
HWE2sided.table(0.17,100)
geno <- c(20,73,7)
HWE2sided(geno)
LDtests documentation built on May 2, 2019, 2:44 p.m.
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Description Usage Arguments Value Author(s) References See Also Examples
Description
Table and plot of HWE p-values for all possible contingency tables consistent with the margins of the input observed contingency table. See HWE2sided for details of the p-values calculated.
Usage
1 | HWE2sided.table(maf, n, ylim = c(0, 1), xlim = NULL)
|
Arguments
maf |
Minor allele frequency |
n |
Total genotype count |
ylim |
Y-axis range for plot |
xlim |
X-axis range for plot |
Value
Outputs the table of HWE p-values for all the contingency tables consistent with the margins of the input table.
Author(s)
Alex Lewin
References
Kulinskaya and Lewin 2008
See Also
Examples
1 2 3 | HWE2sided.table(0.17,100)
geno <- c(20,73,7)
HWE2sided(geno)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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