R/constructor-functions.R

In MALDIquant: Quantitative Analysis of Mass Spectrometry Data

## MassSpectrum

## createMassSpectrum
##  default constructor: MassSpectrum class
##
## params:
##  mass: vector, spectrum mass
##  intensity: vector, spectrum intensities
##  metaData: list, metadata
##
## returns:
##  a MassSpectrum object
##
createMassSpectrum <- function(mass, intensity, metaData=list()) {
  object <- new(Class="MassSpectrum", mass=mass, intensity=intensity, metaData=metaData)
  .reorder(object)
}

## end of MassSpectrum

## MassPeaks

## createMassPeaks
##  default constructor: MassPeaks class
##
## params:
##  mass: vector, peaks mass
##  intensity: vector, peaks intensities
##  snr: vector, peaks snr
##  metaData: list, metadata
##
## returns:
##  a MassPeaks object
##
createMassPeaks <- function(mass, intensity,
                            snr=rep.int(NA_real_, length(intensity)),
                            metaData=list()) {
  object <- new(Class="MassPeaks", mass=mass, intensity=intensity, snr=snr,
                metaData=metaData)
  .reorder(object)
}

## end of MassPeaks