MCPMod: Design and Analysis of Dose-Finding Studies
Version 1.0-9

Implements a methodology for the design and analysis of dose-response studies that combines aspects of multiple comparison procedures and modeling approaches (Bretz, Pinheiro and Branson, 2005, Biometrics 61, 738-748, ). The package provides tools for the analysis of dose finding trials as well as a variety of tools necessary to plan a trial to be conducted with the MCP-Mod methodology. Please note: The 'MCPMod' package will not be further developed, all future development of the MCP-Mod methodology will be done in the 'DoseFinding' R-package.

Browse man pages Browse package API and functions Browse package files

AuthorBjoern Bornkamp, Jose Pinheiro and Frank Bretz
Date of publication2016-11-24 23:33:11
MaintainerBjoern Bornkamp <bornkamp@statistik.tu-dortmund.de>
LicenseGPL-3
Version1.0-9
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("MCPMod")

Man pages

betaMod: Beta model
biom: Biometrics Dose Response data
critVal: Calculate critical value for multiple contrast test
emax: Emax model
exponential: Exponential (power) model
fullMod: Calculate location and scale parameters for candidate set of...
genDFdata: Simulate dose-response data
getPars: Calculate location and scale parameters
guesst: Calculate guesstimates based on prior knowledge
IBS: Irritable Bowel Syndrome Dose Response data
linear: Linear Model
linlog: Linear in log dose Model
logistic: Logistic Model
LP: Sensitivity analysis for misspecification of standardized...
MCPMod: Perform MCPMod analysis of a data set
MCPMod-internal: Internal MCPMod functions
MCPMod-package: Design and Analysis of Dose-Finding Studies
modelMeans: Calculate mean vectors for a given candidate set
mvtnorm.control: Control options for pmvt and qmvt functions
planMM: Calculate planning quantities for MCPMod
plot.fullMod: Plot method for fullMod objects
plot.LP: Plot method for LP objects
plot.MCPMod: Plot MCPMod model fits
plotModels: Plot candidate models
plot.planMM: Plotting a planMM object
plot.powerMM: Plot method for powerMM objects
powCalc: Calculate the power for the multiple contrast test
powerMM: Calculate power for different sample sizes
quadratic: Quadratic model
sampSize: Sample size calculations for MCPMod
sigEmax: Sigmoid Emax Model

Functions

AIC.fitMCPMod Man page Source code
IBS Man page
LP Man page Source code
MCPMod Man page Source code
MCPMod-package Man page
betaMod Man page Source code
biom Man page
coef.fitMCPMod Man page Source code
critVal Man page Source code
emax Man page Source code
exponential Man page Source code
fitModel Man page
fullMod Man page Source code
genDFdata Man page Source code
getDef Man page Source code
getDose Man page Source code
getDoseEst Man page Source code
getGrad Man page Source code
getInit Man page
getInitBeta Man page Source code
getInitLRasymp Man page
getInitP Man page
getOptCont Man page Source code
getPars Man page Source code
getStdCont Man page Source code
getTstat Man page Source code
guesst Man page Source code
linear Man page Source code
linlog Man page Source code
logistic Man page Source code
modContr Man page Source code
modelMeans Man page
modelSelect Man page Source code
mvtnorm.control Man page Source code
pValues Man page Source code
planMM Man page Source code
plot.LP Man page Source code
plot.MCPMod Man page Source code
plot.fullMod Man page Source code
plot.planMM Man page Source code
plot.powerMM Man page Source code
plotModels Man page Source code
powCalc Man page Source code
powerMM Man page Source code
predict.fitMCPMod Man page Source code
print.LP Man page Source code
print.MCPMod Man page Source code
print.planMM Man page Source code
print.sampSize Man page Source code
print.summary.MCPMod Man page Source code
quadratic Man page Source code
recovNames Man page Source code
sampSize Man page Source code
sigEmax Man page Source code
summary.MCPMod Man page Source code

Files

inst
inst/CITATION
inst/README
inst/doc
inst/doc/MCPMod.pdf
ToDo
tests
tests/MMTests.R
NAMESPACE
NEWS
data
data/IBS.txt.gz
data/biom.txt.gz
R
R/analysisMM.R
R/planMCPMod.R
MD5
README
DESCRIPTION
ChangeLog
man
man/critVal.Rd
man/biom.Rd
man/genDFdata.Rd
man/IBS.Rd
man/quadratic.Rd
man/powCalc.Rd
man/sampSize.Rd
man/modelMeans.Rd
man/plot.planMM.Rd
man/MCPMod-package.Rd
man/plot.powerMM.Rd
man/logistic.Rd
man/getPars.Rd
man/exponential.Rd
man/powerMM.Rd
man/linlog.Rd
man/guesst.Rd
man/mvtnorm.control.Rd
man/MCPMod-internal.Rd
man/sigEmax.Rd
man/plot.MCPMod.Rd
man/plot.LP.Rd
man/linear.Rd
man/betaMod.Rd
man/planMM.Rd
man/emax.Rd
man/plotModels.Rd
man/LP.Rd
man/plot.fullMod.Rd
man/fullMod.Rd
man/MCPMod.Rd
MCPMod documentation built on May 29, 2017, 9:17 a.m.