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Provides automatization for plot generation succeeding common molecular dynamics analyses. This includes straightforward plots, such as RMSD (Root-Mean-Square-Deviation) and RMSF (Root-Mean-Square-Fluctuation) but also more sophisticated ones such as dihedral angle maps, hydrogen bonds, cluster bar plots and DSSP (Definition of Secondary Structure of Proteins) analysis. Currently able to load GROMOS, GROMACS and AMBER formats, respectively.
Package details |
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Author | Christian Margreitter [aut, cre], Chris Oostenbrink [aut] |
Maintainer | Christian Margreitter <christian.margreitter@gmail.com> |
License | GPL-3 |
Version | 1.0.1 |
URL | https://github.com/MDplot/MDplot |
Package repository | View on CRAN |
Installation |
Install the latest version of this package by entering the following in R:
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