load_noe: Loading NOE violations

In MDplot: Visualising Molecular Dynamics Analyses

Description

This function load one or more Nuclear-Overhauser-Effect (NOE) violation files. Its output can be feeded into function noe(). Note, that in case the number of used bins differ between files, the resulting matrix is automatically expanded to cover all bins.

Usage

load_noe( files,
          mdEngine = "GROMOS" )

Arguments

files	Vector of file paths to be loaded.
mdEngine	Argument distinguishes between input formats based on the molecular dynamics engine used. Currently available: "GROMOS".

Value

Returns a matrix, in which the first column holds the bin boundaries and the following columns represent the data from the respective input files, i.e. the number of violations in the respective bin.

Author(s)

Christian Margreitter

Examples

# GROMOS
load_noe( c( system.file( "extdata/noe_example_1.txt.gz",
                          package = "MDplot" ),
             system.file( "extdata/noe_example_2.txt.gz",
                          package = "MDplot" ) ) )

MDplot documentation built on May 2, 2019, 7:02 a.m.