Man pages for MareyMap
Estimation of Meiotic Recombination Rates Using Marey Maps
| Arabidopsis_thaliana | The marey map for the species Arabidopsis thaliana |
| argList-methods | Methods for function argList in package 'MareyMap' |
| Caenorhabditis_elegans | The marey map for the species Caenorhabditis_elegans |
| color-methods | Accessors for slot color in package 'MareyMap' |
| createOrder-methods | createOrder |
| Drosophila_melanogaster | The marey map for the species Drosophila melanogaster |
| geneticDistances-methods | Accessors for slot geneticDistances |
| getInterList-methods | returns a list of interpolation methods. |
| Homo_sapiens | The marey map for the species Homo sapiens (female, male and... |
| interpolate-methods | interpolate |
| Interpolation-class | Class "Interpolation" |
| interpolation-methods | set or returns an interpolation. |
| InterpolationParam-class | Class "InterpolationParam" |
| InterpolationParam-methods | Methods for Function InterpolationParam in Package 'MareyMap' |
| interpolations-methods | accessors for slot interpolations |
| MapCollection-class | Class "MapCollection" |
| MapCollection-methods | Constructor for class MapCollection |
| mapName-methods | accessors for the slot mapName |
| mapNames-methods | mapNames |
| MareyMap-class | Class "MareyMap" |
| MareyMap-methods | Constructor for object of the class MareyMap. |
| markerNames-methods | Accessors for the class markerNames. |
| markerValidity-methods | accessors for slot markerValidity |
| MMLoess-class | Class "MMLoess". Interpolation method plug-in for MareyMap |
| MMSlidingWindow-class | Class "MMSlidingWindow" Interpolation method plug-in for... |
| MMSpline3-class | Class "MMSpline3" Interpolation using cubic splines |
| name-Methods | Accessor for slot name. |
| paramDefault-methods | Accessors for slot paramDefault |
| paramDesc-methods | Accessors for the slot paramDesc |
| paramFun-methods | accessors for the slot paramFun |
| paramMax-methods | Accessors for the slot paramMax. |
| paramMin-methods | Accessors for slot paramMin. |
| paramName-methods | Accessors for the slot paramName. |
| paramType-methods | Accessors for the slot paramType. |
| paramValues-methods | Accessor for the slot paramValues. |
| persistent-methods | Accessors for the slot persistent. |
| physicalPositions-methods | Accessors for the slot physicalPositions |
| plotMarkers-methods | plotMarkers |
| plotModel-methods | plotModel |
| plotModels-methods | plotModels |
| plotRate-methods | plotRate |
| plotRates-methods | plotRates |
| query-methods | Methods for Function query |
| rates-methods | Accessors for the slot rates |
| registerInterpolationMethod-methods | registerInterpolationMethods |
| removeMarker-methods | removeMarker |
| SpeciesMaps-class | Class "MapSet" |
| SpeciesMaps-methods | Constructor for the class MapSet. |
| speciesName-methods | Accessors for the slot setName. |
| speciesNames-methods | setNames |
| startMareyMapGUI-methods | MareyMapGUI launcher |
| textFile-methods | textFile |
| userParam-methods | userParam |
| validPositions-methods | validPositions |
| visible-methods | Accessors for the slot visible |
