MatrixEQTL: Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
Version 2.1.1

Matrix eQTL is designed for fast eQTL analysis on large datasets. Matrix eQTL can test for association between genotype and gene expression using linear regression with either additive or ANOVA genotype effects. The models can include covariates to account for factors as population stratification, gender, and clinical variables. It also supports models with heteroscedastic and/or correlated errors, false discovery rate estimation and separate treatment of local (cis) and distant (trans) eQTLs.

Package details

AuthorAndrey Shabalin
Date of publication2015-02-03 06:53:36
MaintainerAndrey Shabalin <ashabalin@vcu.edu>
LicenseLGPL-3
Version2.1.1
URL http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("MatrixEQTL")

Try the MatrixEQTL package in your browser

Any scripts or data that you put into this service are public.

MatrixEQTL documentation built on May 29, 2017, 4:23 p.m.