API for MatrixEQTL
Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
| Global functions | |
|---|---|
| .SNP_process_split_for_ANOVA | Source code |
| .SetNanRowMean | Source code |
| .histme | Source code |
| .my.pmax | Source code |
| .my.pmin | Source code |
| .pv.nz | Source code |
| .qqme | Source code |
| .seq | Source code |
| Covariates | Man page |
| GE | Man page |
| MatrixEQTL | Man page |
| MatrixEQTL-package | Man page |
| MatrixEQTL_cis_code | Man page |
| Matrix_eQTL_engine | Man page Source code |
| Matrix_eQTL_main | Man page Source code |
| NCOL,SlicedData-method | Man page |
| NROW,SlicedData-method | Man page |
| SNP | Man page |
| SlicedData | Man page |
| SlicedData-class | Man page |
| [[,SlicedData-method | Man page |
| [[<-,SlicedData-method | Man page |
| as.matrix,SlicedData-method | Man page |
| colMeans,SlicedData-method | Man page |
| colSums,SlicedData-method | Man page |
| colnames,SlicedData-method | Man page |
| colnames<-,SlicedData-method | Man page |
| dim,SlicedData-method | Man page |
| formatnum | Source code |
| geneloc | Man page |
| length,SlicedData-method | Man page |
| modelANOVA | Man page |
| modelLINEAR | Man page |
| modelLINEAR_CROSS | Man page |
| ncol,SlicedData-method | Man page |
| nrow,SlicedData-method | Man page |
| plot.MatrixEQTL | Man page Source code |
| rowMeans,SlicedData-method | Man page |
| rowSums,SlicedData-method | Man page |
| rownames,SlicedData-method | Man page |
| rownames<-,SlicedData-method | Man page |
| show,SlicedData-method | Man page |
| snpsloc | Man page |
| summary.SlicedData | Man page Source code |
