QStat.PermutationTest: Accompanying permutation test for QStat.Calculate
In MetStaT: Statistical metabolomics tools
Description
Usage
Arguments
Value
Author(s)
References
Description
Performs a permutation test for the QStat.Calculate outcome, which is by default already done by that method.
Usage
1
QStat.PermutationTest(Qresult, no.permutations = "all", quietly = FALSE)
Arguments
Qresult
the result of the function QStat.Calculate.
no.permutations
either 'all', in which case all possible permutations are performed. Or a numerical value in case a certain number of randomly determined permutations should be performed.
quietly
boolean. Set to TRUE in case you wish to receive intermediate text feedback.
Value
The same list as the input argument Qresult is returned, but with a (re)calculated p value.
Author(s)
Diana Hendrickx and Tim Dorscheidt
References
Global test for metabolic pathway differences between conditions. Diana M. Hendrickx, Huub C.J. Hoefsloot, Margriet M.W.B. Hendriks, Andr?. Canelas and Age K. Smilde. Analytica Chimica Acta, Volume 719 (2012), pages 8 - 15
MetStaT documentation built on May 2, 2019, 1:45 p.m.
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Description Usage Arguments Value Author(s) References
Description
Performs a permutation test for the QStat.Calculate outcome, which is by default already done by that method.
Usage
1 | QStat.PermutationTest(Qresult, no.permutations = "all", quietly = FALSE)
|
Arguments
Qresult |
the result of the function QStat.Calculate. |
no.permutations |
either 'all', in which case all possible permutations are performed. Or a numerical value in case a certain number of randomly determined permutations should be performed. |
quietly |
boolean. Set to TRUE in case you wish to receive intermediate text feedback. |
Value
The same list as the input argument Qresult is returned, but with a (re)calculated p value.
Author(s)
Diana Hendrickx and Tim Dorscheidt
References
Global test for metabolic pathway differences between conditions. Diana M. Hendrickx, Huub C.J. Hoefsloot, Margriet M.W.B. Hendriks, Andr?. Canelas and Age K. Smilde. Analytica Chimica Acta, Volume 719 (2012), pages 8 - 15
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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