poisdata: Simulated DEPENDENT data with POISSON (count) traits for...

In MiRKAT: Microbiome Regression-Based Kernel Association Tests

Simulated DEPENDENT data with POISSON (count) traits for correlated regression-based analysis (i.e. CSKAT, GLMMMiRKAT)

Description

Simulated DEPENDENT data with POISSON (count) traits for correlated regression-based analysis (i.e. CSKAT, GLMMMiRKAT)

Usage

data(poisdata)

Format

A list containing three data objects for correlated microbiome data with binary response variable (described below).

pois.otu.tab

Simulated OTU data for correlated regression-based analysis; 59 rows and 730 columns, rows being patients and columns being OTUs

pois.meta

Simulated metadata for correlated regression-based analysis; 59 rows and 4 columns, rows being patients and columns being the outcome variable, subject identifier, and covariates to possibly account for in any regression modeling

pois.tree

Simulated rooted phylogenetic tree with 730 tips and 729 nodes

MiRKAT documentation built on March 7, 2023, 5:55 p.m.