NMsim
Seamless 'Nonmem' Simulation Platform

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Files in NMsim
Seamless 'Nonmem' Simulation Platform

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NAMESPACE
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LICENSE
R/NMwriteInitsOne.R R/padZeros.R R/NMsim_known.R R/NMsim_VarCov.R R/samplePars_mvrnorm.R R/dcastSe.R R/NMcreateMatLines.R R/checkTimes.R R/NMreadSimModTab.R R/NMsim_asis.R R/NMwriteInits.R R/NMctl.R R/writeTextFile.R R/NMsim_default.R R/typicalize.R R/NMsim_typical.R R/NMcreateDoses.R R/expandCovs.R R/samplePars.R R/inputArchive.R R/modTab.R R/message_dt.R R/NMsim_helpers.R R/NMsimCheckMod.R R/callNonmemDirect.R R/addClass.R R/NMwriteSizes.R R/NMrunLin.R R/NMsimTestConf.R R/NMgenPNM.R R/forestSummarize.R R/nameMultipleFiles.R R/NMwriteSectionOne.R R/cleaningPatterns.R R/seedFunDefault.R R/reportFailedRun.R R/deleteTmpDirs.R R/NMextractText.R R/NMsim_NWPRI.R R/summary_NMsimRes.R R/simPopEtas.R R/sampleParsSimpar.R R/readParsWide.R R/NMreadSimOne.R R/searchExecutable.R R/NMreadTabFast.R R/simpleCharArg.R R/NMseed.R R/NMsimModTab_utils.R R/NMupdateFn.R R/NWPRI_df.R R/modifyHelpers.R R/NMaddSamples.R R/NMreadSizes.R R/addResVar.R R/NMupdateInits.R R/addBlocks.R R/NMreplaceInits.R R/NMwriteFilters.R R/fnAppend.R R/getSystemType.R R/modifyModel.R R/findUpdated.R R/prettyMatLines.R R/prioritizePaths.R R/addEVID2.R R/completeCov.R R/zzz.R R/NMsimDataPrepare.R R/NMsim_EBE.R R/summarizeCovs.R R/addParType.R R/NMrunWin.R R/sampleCovs.R R/NMreadInits.R R/pasteFuns.R R/NMsimRes_utils.R R/NMsim.R R/NMreadSim.R R/samplePars_simpar.R R/forestDefineCovs.R R/NMreadSection.R R/NMexec.R R/genPhiFile.R R/NMexecDirectory.R
inst/examples/data/xgxr2covs.csv
inst/examples/data/xgxr12.csv
inst/examples/data/xgxr2_flag0.csv
inst/examples/data/xgxr032_bs.csv
inst/examples/data/xgxr2_flag0_meta.txt
inst/examples/data/xgxr2_meta.txt
inst/examples/data/xgxr2covs_meta.txt
inst/examples/data/xgxr_pd.rds
inst/examples/data/xgxr021_bs.rds
inst/examples/data/xgxr021_bs.csv
inst/examples/data/xgxr12.rds
inst/examples/data/xgxr021_bs_meta.txt
inst/examples/data/xgxr2.csv
inst/examples/data/xgxr12_meta.txt
inst/examples/data/xgxr2covs.rds
inst/examples/data/xgxr032_bs.rds
inst/examples/data/xgxr032_bs_meta.txt
inst/examples/data/xgxr2_flag0.rds
inst/examples/data/xgxr2.rds
inst/examples/nonmem/xgxr021.cov
inst/examples/nonmem/xgxr021.phi
inst/examples/nonmem/xgxr033.phi
inst/examples/nonmem/xgxr033.shk
inst/examples/nonmem/xgxr033.ext
inst/examples/nonmem/xgxr032_etas.txt
inst/examples/nonmem/xgxr134.lst
inst/examples/nonmem/xgxr046_res.txt
inst/examples/nonmem/xgxr033.pnm
inst/examples/nonmem/xgxr032_res.txt
inst/examples/nonmem/xgxr134_etas.txt
inst/examples/nonmem/xgxr046.mod
inst/examples/nonmem/xgxr032.cor
inst/examples/nonmem/xgxr134.ext
inst/examples/nonmem/xgxr044.pnm
inst/examples/nonmem/xgxr032.cov
inst/examples/nonmem/xgxr046_etas.txt
inst/examples/nonmem/xgxr033.mod
inst/examples/nonmem/xgxr032_input.rds
inst/examples/nonmem/xgxr134.coi
inst/examples/nonmem/xgxr021.ext
inst/examples/nonmem/xgxr046.shk
inst/examples/nonmem/xgxr021.coi
inst/examples/nonmem/xgxr046.ext
inst/examples/nonmem/xgxr032.ext
inst/examples/nonmem/xgxr033.coi
inst/examples/nonmem/xgxr046_input.rds
inst/examples/nonmem/xgxr134_res.txt
inst/examples/nonmem/xgxr046.phi
inst/examples/nonmem/xgxr032.lst
inst/examples/nonmem/xgxr134.cor
inst/examples/nonmem/xgxr033_etas.txt
inst/examples/nonmem/xgxr033_input.rds
inst/examples/nonmem/xgxr033_res.txt
inst/examples/nonmem/xgxr044.mod
inst/examples/nonmem/xgxr021.mod
inst/examples/nonmem/xgxr021.shk
inst/examples/nonmem/xgxr032.phi
inst/examples/nonmem/xgxr021_res.txt
inst/examples/nonmem/xgxr032.mod
inst/examples/nonmem/xgxr032.shk
inst/examples/nonmem/xgxr044_input.rds
inst/examples/nonmem/xgxr046.lst
inst/examples/nonmem/xgxr033.cor
inst/examples/nonmem/xgxr021_input.rds
inst/examples/nonmem/xgxr021.cor
inst/examples/nonmem/xgxr134.shk
inst/examples/nonmem/xgxr134.cov
inst/examples/nonmem/xgxr134.mod
inst/examples/nonmem/xgxr134.phi
inst/examples/nonmem/xgxr032.coi
inst/examples/nonmem/xgxr132.mod
inst/examples/nonmem/xgxr033.cov
inst/examples/nonmem/xgxr021.lst
inst/examples/nonmem/xgxr033.lst
inst/examples/derived/dat_sim1.rds
inst/examples/derived/dat_sim1.csv
inst/examples/outputs/example_table_exposure.html
inst/examples/outputs/exdf_known_check.png
inst/examples/outputs/exdf_known_time_ipred.png
inst/examples/outputs/example_table_exposure.png
inst/examples/outputs/example_table_exposure.pptx
inst/examples/outputs/exdf_ci_pi_bs.png
inst/examples/outputs/example_plot_sd.png
inst/examples/outputs/example_table_exposure.docx
inst/examples/outputs/exdf_pi_typ.png
inst/examples/outputs/example_plot_pi.png
inst/bash/wait_qsub.sh
tests/testthat.R tests/testthat/test_NMgenPNM.R tests/testthat/test_genPhiFile.R tests/testthat/test_summarizeCovs.R tests/testthat/test_NMsim.R tests/testthat/test_simplePath.R tests/testthat/test_samplePars_mvrnorm.R tests/testthat/test_NMctl.R tests/testthat/test_nameMultipleFiles.R tests/testthat/test_NMwriteSizes.R tests/testthat/test_NMsimCheckMod.R tests/testthat/test_NMcreateDoses.R tests/testthat/test_NMseed.R tests/testthat/test_NMcreateMatLines.R tests/testthat/test_NMwriteInits.R tests/testthat/test_expandCovLists.R tests/testthat/test_NMsim_default.R tests/testthat/test_NMaddSamples.R tests/testthat/test_addResVar.R tests/testthat/test_NMreadParsWide.R tests/testthat/test_addEVID2.R tests/testthat/test_sampleParsSimpar.R tests/testthat/test_NMreplaceInits.R tests/testthat/test_rbind_NMsimRes.R tests/testthat/test_NMsim_VarCov.R tests/testthat/test_NMreadSim.R tests/testthat/test_simPopEtas.R tests/testthat/test_NMsim_NWPRI.R tests/testthat/test_typicalize.R tests/testthat/test_NMwriteFilters.R
tests/testthat/testData/data/xgxr2covs.csv
tests/testthat/testData/data/xgxr12.csv
tests/testthat/testData/data/xgxr1.csv
tests/testthat/testData/data/pred_data1.rds
tests/testthat/testData/data/pred_data1.csv
tests/testthat/testData/data/xgxr2_meta.txt
tests/testthat/testData/data/xgxr2covs_meta.txt
tests/testthat/testData/data/xgxr12.rds
tests/testthat/testData/data/xgxr021_parsWide.rds
tests/testthat/testData/data/xgxr2.csv
tests/testthat/testData/data/xgxr12_meta.txt
tests/testthat/testData/data/xgxr2covs.rds
tests/testthat/testData/data/pred_data1_meta.txt
tests/testthat/testData/data/xgxr2.rds
tests/testthat/testData/nonmem/xgxr021.cov
tests/testthat/testData/nonmem/xgxr053.lst
tests/testthat/testData/nonmem/iov_same.mod
tests/testthat/testData/nonmem/xgxr011_fo1.txt
tests/testthat/testData/nonmem/xgxr053.phi
tests/testthat/testData/nonmem/xgxr021.phi
tests/testthat/testData/nonmem/xgxr033.phi
tests/testthat/testData/nonmem/xgxr033.shk
tests/testthat/testData/nonmem/xgxr033.ext
tests/testthat/testData/nonmem/xgxr134.lst
tests/testthat/testData/nonmem/predu.vpt
tests/testthat/testData/nonmem/xgxr032_res.txt
tests/testthat/testData/nonmem/xgxr134_etas.txt
tests/testthat/testData/nonmem/xgxr032.cor
tests/testthat/testData/nonmem/xgxr134.ext
tests/testthat/testData/nonmem/xgxr032.cov
tests/testthat/testData/nonmem/xgxr053.mod
tests/testthat/testData/nonmem/xgxr032_sd1_NWPRI.mod
tests/testthat/testData/nonmem/xgxr057_res.txt
tests/testthat/testData/nonmem/xgxr057.shk
tests/testthat/testData/nonmem/xgxr011.lst
tests/testthat/testData/nonmem/xgxr011.ext
tests/testthat/testData/nonmem/xgxr011.mod
tests/testthat/testData/nonmem/xgxr033.mod
tests/testthat/testData/nonmem/pred030.lst
tests/testthat/testData/nonmem/xgxr021com.mod
tests/testthat/testData/nonmem/predu.tab
tests/testthat/testData/nonmem/xgxr053.cov
tests/testthat/testData/nonmem/xgxr032_input.rds
tests/testthat/testData/nonmem/predu.cov
tests/testthat/testData/nonmem/predu.res
tests/testthat/testData/nonmem/xgxr134.coi
tests/testthat/testData/nonmem/xgxr021.ext
tests/testthat/testData/nonmem/xgxr057.cor
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tests/testthat/testData/nonmem/xgxr025b_res.txt
tests/testthat/testData/nonmem/xgxr041.mod
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tests/testthat/testData/nonmem/xgxr057.coi
tests/testthat/testData/nonmem/predu.vpd
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tests/testthat/testData/nonmem/xgxr053.cor
tests/testthat/testData/nonmem/xgxr134.cor
tests/testthat/testData/nonmem/example1.csv
tests/testthat/testData/nonmem/xgxr134_input.rds
tests/testthat/testData/nonmem/xgxr033_input.rds
tests/testthat/testData/nonmem/xgxr033_res.txt
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tests/testthat/testData/nonmem/xgxr021.cor
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tests/testthat/testData/nonmem/xgxr134.cov
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tests/testthat/testData/nonmem/xgxr021_sd1_NMreadSim/xgxr021_sd1_NMreadSim.ext
tests/testthat/testData/nonmem/xgxr021_sd1_NMreadSim/xgxr021_sd1_NMreadSim.lst
tests/testthat/testData/nonmem/xgxr021_sd1_NMreadSim/xgxr021_sd1_NMreadSim_input.rds
tests/testthat/testData/nonmem/NMsim/xgxr032_VarCov_1_MetaData.rds
tests/testthat/testData/nonmem/NMsim/xgxr021_nmtranfail_MetaData.rds
tests/testthat/testData/nonmem/NMsim/predu_sd2_NWPRI_MetaData.rds
tests/testthat/testData/nonmem/NMsim/xgxr021_default_01.73_MetaData.rds
tests/testthat/testData/nonmem/NMsim/xgxr021_default_01_paths.rds
tests/testthat/testData/nonmem/NMsim/xgxr021_known_01_paths.rds
tests/testthat/testData/nonmem/NMsim/NMsim_xgxr021_default_01_paths_res.fst
tests/testthat/testData/nonmem/NMsim/xgxr021_nmtranfail_paths.rds
tests/testthat/testData/nonmem/NMsim/NMsim_xgxr021_default_01_paths.rds
tests/testthat/testData/nonmem/NMsim/xgxr032_sd1_NWPRI_MetaData.rds
tests/testthat/testData/nonmem/NMsim/xgxr021_default_01_paths_res.fst
tests/testthat/testData/nonmem/NMsim/xgxr021_known_01_paths_res.fst
tests/testthat/testData/nonmem/NMsim/xgxr021_default_01.74_MetaData.rds
tests/testthat/testData/nonmem/NMsim/predu_sd2_NWPRI/predu_sd2_NWPRI.mod
tests/testthat/testData/nonmem/NMsim/predu_sd2_NWPRI/NMsimData_predu_sd2_NWPRI.rds
tests/testthat/testData/nonmem/NMsim/predu_sd2_NWPRI/NMsimData_predu_sd2_NWPRI.csv
tests/testthat/testData/nonmem/NMsim/xgxr021_default_01.73/xgxr021_default_01.73.mod
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tests/testthat/testData/nonmem/NMsim/xgxr021_default_01/xgxr021_default_01.tab
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tests/testthat/testData/nonmem/NMsim/xgxr032_sd1_NWPRI/NMsimData_xgxr032_sd1_NWPRI.rds
tests/testthat/testData/nonmem/NMsim/xgxr032_sd1_NWPRI/NMsimData_xgxr032_sd1_NWPRI.csv
tests/testthat/testData/nonmem/NMsim/xgxr032_VarCov_1/xgxr032_VarCov_1_2.mod
tests/testthat/testData/nonmem/NMsim/xgxr032_VarCov_1/xgxr032_VarCov_1_1.mod
tests/testthat/testData/nonmem/NMsim/xgxr032_VarCov_1/xgxr032_VarCov_1.mod
tests/testthat/testData/nonmem/NMsim/xgxr032_VarCov_1/NMsimData_xgxr032_VarCov_1.csv
tests/testthat/testData/nonmem/NMsim/xgxr032_VarCov_1/NMsimData_xgxr032_VarCov_1.rds
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tests/testthat/testData/nonmem/NMsim/xgxr025_noname/NMsim_xgxr025_noname_input.rds
tests/testthat/testData/nonmem/NMsim/xgxr025_noname/NMsim_xgxr025_noname.tab
tests/testthat/testData/nonmem/NMsim/xgxr025_noname/NMsim_xgxr025_noname.ext
tests/testthat/testData/nonmem/NMsim/xgxr025_noname/NMsimData_xgxr025_noname.csv
tests/testthat/testData/nonmem/NMsim/xgxr025_noname/NMsimData_xgxr025_noname.rds
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tests/testthat/testData/nonmem/NMsim/xgxr021_known_01/NMsimData_xgxr021_known_01.fst
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tests/testthat/testData/nonmem/NMsim/xgxr021_default_01.74/xgxr021_default_01.74.mod
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tests/testthat/testData/nonmem/NMsim/xgxr021_default_01.74/NMsimData_xgxr021_default_01.74.rds
tests/testthat/testData/nonmem/backup_xgxr057/xgxr057.ext
tests/testthat/testData/nonmem/backup_xgxr057/xgxr057.mod
tests/testthat/testData/simres/xgxr134_forest1_ResultsData.fst
tests/testthat/testData/simres/xgxr134_forest1_MetaData.rds
tests/testthat/testData/simres/xgxr021_sd1_NMreadSim_ResultsData.fst
tests/testthat/testData/simres/xgxr021_sd1_NMreadSim_MetaData.rds
tests/testthat/testData/scripts/run_models.R
tests/testthat/simres/xgxr025_sd1_MetaData.rds
tests/testthat/testReference/NMcreateDoses_07.rds
tests/testthat/testReference/NMcreateDoses_03.rds
tests/testthat/testReference/NMseed_01.rds
tests/testthat/testReference/NMaddSamples_08.rds
tests/testthat/testReference/samplePars_02.rds
tests/testthat/testReference/genPhiFile_01.rds
tests/testthat/testReference/NMaddSamples_13.rds
tests/testthat/testReference/NMaddSamples_14.rds
tests/testthat/testReference/summarizeCovs_01.rds
tests/testthat/testReference/NMsim_sizes_05.rds
tests/testthat/testReference/NMwriteFilters_01.rds
tests/testthat/testReference/NMaddSamples_01.rds
tests/testthat/testReference/NMsim_04b.rds
tests/testthat/testReference/addEVID2_09.rds
tests/testthat/testReference/rbind_NMsimRes_01.rds
tests/testthat/testReference/NMsim_inits_06.rds
tests/testthat/testReference/addEVID2_14.rds
tests/testthat/testReference/NMwriteInits_05.rds
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tests/testthat/testReference/NMsim_VarCov_01a.rds
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tests/testthat/testReference/NMsim_VarCov_01c.rds
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tests/testthat/testReference/typicalize_02.rds
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tests/testthat/testReference/forestDefineCovs_01.rds
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tests/testthat/testReference/NMaddSamples_12.rds
man/addParameter.Rd man/addClass.Rd man/overwrite.Rd man/NMrunLin.Rd man/NMsim_NWPRI.Rd man/nameMultipleFiles.Rd man/modTab.Rd man/initsToExt.Rd man/readParsWide.Rd man/NMsim_known.Rd man/NMwriteInits.Rd man/fnAppend.Rd man/message_dt.Rd man/NMsim_VarCov.Rd man/NMreplaceInits.Rd man/add.Rd man/NMexecDirectory.Rd man/NMcreateDoses.Rd man/writeTextFile.Rd man/sampleCovs.Rd man/print.summary_NMsimRes.Rd man/readCtl.Rd man/typicalize.Rd man/findUpdated.Rd man/genPhiFile.Rd man/NMsimCheckMod.Rd man/itriag.Rd man/NMupdateInits.Rd man/sampleParsSimpar.Rd man/forestSummarize.Rd man/NMreadSimModTab.Rd man/NMsim_EBE.Rd man/addParType.Rd man/simpleCharArg.Rd man/NMsimModTabOperations.Rd man/dcastSe.Rd man/addEVID2.Rd man/addResVar.Rd man/NMsim.Rd man/prettyMatLines.Rd man/NMaddSamples.Rd man/NMreadInits.Rd man/NMreadSimRes.Rd man/completeCov.Rd man/expandCovs.Rd man/NMsim_default.Rd man/NMreadSimModTabOne.Rd man/deleteTmpDirs.Rd man/NMreadSizes.Rd man/NMsim_asis.Rd man/callNonmemDirect.Rd man/checkTimes.Rd man/NMexec.Rd man/modifyModel.Rd man/NMsim_typical.Rd man/samplePars.Rd man/NMcreateMatLines.Rd man/NMseed.Rd man/simplePath.Rd man/cleanStrings.Rd man/padZeros.Rd man/triagSize.Rd man/simPopEtas.Rd man/NWPRI_df.Rd man/NMreadSection.Rd man/NMreadSimResOne.Rd man/prioritizePaths.Rd man/pasteFuns.Rd man/NMsimResOperations.Rd man/summary.NMsimRes.Rd man/summarizeCovs.Rd man/NMreadSim.Rd man/count_ij.Rd man/forestDefineCovs.Rd man/NMwriteFilters.Rd man/NMwriteSizes.Rd man/jtriag.Rd man/inputArchiveDefault.Rd man/NMextractText.Rd man/NMgenPNM.Rd man/NMupdateFn.Rd man/addBlocks.Rd man/as.NMctl.Rd man/NMsimTestConf.Rd
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NMsim documentation built on Sept. 9, 2025, 5:33 p.m.

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