check_npx_all_na_assays: Help function to identify Olink assays with all quantified...
In OlinkAnalyze: Facilitate Analysis of Proteomic Data from Olink
check_npx_all_na_assays R Documentation
Help function to identify Olink assays with all quantified values NA
Description
This function checks if there are assays with the quantified values for all
samples NA.
Usage
check_npx_all_na_assays(df, col_names)
Arguments
df
A "tibble" or "ArrowObject"
from read_npx.
col_names
A list of matched column names. This is the output of the
check_npx_col_names function.
Details
We have added the tags importFrom for "dbplyr" and "duckdb" because
"devtools::check()" would complain with a note that the two libraries are
imported but never used. To avoid that we used solutions taken from here:
https://github.com/hadley/r-pkgs/issues/203
https://github.com/pbs-software/pbs-modelling/issues/95
Value
A character vector containing OlinkID of assays with quantified
values NA for all samples, otherwise returns character(0).
Author(s)
Simon Forsberg
Masoumeh Sheikhi
OlinkAnalyze documentation built on June 24, 2026, 1:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| check_npx_all_na_assays | R Documentation |
Help function to identify Olink assays with all quantified values NA
Description
This function checks if there are assays with the quantified values for all samples NA.
Usage
check_npx_all_na_assays(df, col_names)
Arguments
df |
A "tibble" or "ArrowObject"
from |
col_names |
A list of matched column names. This is the output of the check_npx_col_names function. |
Details
We have added the tags importFrom for "dbplyr" and "duckdb" because "devtools::check()" would complain with a note that the two libraries are imported but never used. To avoid that we used solutions taken from here:
https://github.com/hadley/r-pkgs/issues/203
https://github.com/pbs-software/pbs-modelling/issues/95
Value
A character vector containing OlinkID of assays with quantified values NA for all samples, otherwise returns character(0).
Author(s)
Simon Forsberg Masoumeh Sheikhi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.