check_npx_all_na_sample: Help function to identify Olink samples with all quantified...
In OlinkAnalyze: Facilitate Analysis of Proteomic Data from Olink
check_npx_all_na_sample R Documentation
Help function to identify Olink samples with all quantified values NA
Description
This function checks if there are samples with the quantified values for all
assays NA.
Usage
check_npx_all_na_sample(df, col_names)
Arguments
df
A "tibble" or "ArrowObject"
from read_npx.
col_names
A list of matched column names. This is the output of the
check_npx_col_names function.
Details
We have added the tags importFrom for "dbplyr" and "duckdb" because
"devtools::check()" would complain with a note that the two libraries are
imported but never used. To avoid that we used solutions taken from here:
https://github.com/hadley/r-pkgs/issues/203
https://github.com/pbs-software/pbs-modelling/issues/95
Value
A character vector containing SampleID of samples with
quantified values NA for all assays, otherwise returns
character(0).
Author(s)
Simon Forsberg
Masoumeh Sheikhi
Klev Diamanti
OlinkAnalyze documentation built on June 24, 2026, 1:06 a.m.
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| check_npx_all_na_sample | R Documentation |
Help function to identify Olink samples with all quantified values NA
Description
This function checks if there are samples with the quantified values for all assays NA.
Usage
check_npx_all_na_sample(df, col_names)
Arguments
df |
A "tibble" or "ArrowObject"
from |
col_names |
A list of matched column names. This is the output of the check_npx_col_names function. |
Details
We have added the tags importFrom for "dbplyr" and "duckdb" because "devtools::check()" would complain with a note that the two libraries are imported but never used. To avoid that we used solutions taken from here:
https://github.com/hadley/r-pkgs/issues/203
https://github.com/pbs-software/pbs-modelling/issues/95
Value
A character vector containing SampleID of samples with quantified values NA for all assays, otherwise returns character(0).
Author(s)
Simon Forsberg Masoumeh Sheikhi Klev Diamanti
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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