cluster_heatmap: cluster_heatmap
In OmicInt: Omics Network Exploration

Description Usage Arguments Value Examples

cluster_heatmap uses information mined from STRING database to map experimental, referenced, and inferred interactions to see if there are any interactors in the set of significantly changed genes. This heatmap provides clustered visualisation of all genes and the genes that have shared interactions.

1	cluster_heatmap(data)

data

requires a data frame containing gene names as row names and a column with LFC values. Class - data frame

heatmap; class - plot

 ## Not run: 
path_to_test_data<- system.file("extdata", "test_data.tabular", package="OmicInt")
# basic usage of cluster_heatmap
df<-utils::read.table(path_to_test_data)
cluster_heatmap(df)

## End(Not run)