miRNA_network: miRNA_network

In OmicInt: Omics Network Exploration

Description

miRNA_network function allows to assess how many genes are regulated by the same miRNA. Note if you supply too many genes the function will take longer to run.

Usage

miRNA_network(genes)

Arguments

genes

Requires a gene list (HGNC gene symbol); class list of strings

Value

a heatmap plot for found interactions and a list of miRNA and regulated genes. The list output value can be used for downstream analyses. Classes returned - a plot and a list

Examples

## Not run: 
# basic usage of miRNA_network
return_df<-miRNA_network(c("PIP4K2A","MOB1A","PHACTR2","MDM2","YWHAG" ,"RAB31"  ))
head(return_df)

## End(Not run)

OmicInt documentation built on Oct. 28, 2021, 5:09 p.m.