Description Usage Arguments Value Examples
Function provides visualisation of how the highest and lowest LFCscore genes cluster based on protein cellular location data. Function requires a data frame generated by the score_genes function.
1 | location_map(data, num = 0)
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data |
Requires a data frame generated by score_genes; class - data frame |
num |
a number for genes to cluster from top upregulated and downregulated genes, if not selected all genes will be used; default 0, i.e. do not select a smaller set; class - integer |
dendogram, class - plot
1 2 3 4 5 6 | ## Not run:
path_to_test_data<- system.file("extdata", "test_data.tabular", package="OmicInt")
# basic usage of location_map
df<-utils::read.table(path_to_test_data)
location_map(df)
## End(Not run)
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