chromDict: Convert a rank object into a chromDict.
In PCBS: Principle Component BiSulfite
chromDict R Documentation
Convert a rank object into a chromDict.
Description
Internal to many functions; creates a chromDict for faster computing times. chromDict can be run separately to speed up functions run iteratively.
A chromDict is a list of chromosome-specific data.tables generated from ranks.
Usage
chromDict(ranks)
Arguments
ranks
getPCRanks output data frame
Value
Returns a list of data.tables for each chromosome, for faster analysis. Used internall by many PCBS functions.
Examples
ranks <- getPCRanks(eigen, IDs = c("trt", "ctl"), PC = 1)
chromDictObj <- chromDict(ranks)
PCBS documentation built on May 29, 2024, 9:48 a.m.
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| chromDict | R Documentation |
Convert a rank object into a chromDict.
Description
Internal to many functions; creates a chromDict for faster computing times. chromDict can be run separately to speed up functions run iteratively. A chromDict is a list of chromosome-specific data.tables generated from ranks.
Usage
chromDict(ranks)
Arguments
ranks |
getPCRanks output data frame |
Value
Returns a list of data.tables for each chromosome, for faster analysis. Used internall by many PCBS functions.
Examples
ranks <- getPCRanks(eigen, IDs = c("trt", "ctl"), PC = 1)
chromDictObj <- chromDict(ranks)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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