Files in POUMM
The Phylogenetic Ornstein-Uhlenbeck Mixed Model
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/utilities.R
R/POUMM.R
R/vignetteCachedResults.R
R/fitPOUMM.R
R/paramsPOUMM.R
R/specPOUMM.R
R/summaryPOUMM.R
R/likPOUMM.R
src/Makevars
src/SPLITT.h
src/Rcpp.cpp
src/AbcPOUMM.h
inst/REFERENCES.bib
inst/CITATION
inst/doc/UserGuide.Rmd
inst/doc/InterpretingPOUMM.html
inst/doc/UserGuide.R
inst/doc/UserGuide.html
inst/doc/InterpretingPOUMM.Rmd
inst/doc/InterpretingPOUMM.R
build/vignette.rds
tests/test-all.R
tests/testthat/test-parameters.R
tests/testthat/test-fit.R
tests/testthat/test-lik.R
tests/testthat/test-specify.R
vignettes/UserGuide.Rmd
vignettes/InterpretingPOUMM.Rmd
vignettes/REFERENCES.bib
data/vignetteCachedResults.rda
man/chld.Rd
man/PhylogeneticH2.Rd
man/covPOUMM.Rd
man/likPOUMMGivenTreeVTips.Rd
man/covFunPOUMM.Rd
man/logLik.POUMM.Rd
man/residuals.POUMM.Rd
man/summary.POUMM.Rd
man/maxLikPOUMMGivenTreeVTips.Rd
man/rVNodesGivenTreePOUMM.Rd
man/analyseMCMCs.Rd
man/covHPDFunPOUMM.Rd
man/coef.POUMM.Rd
man/edgesFrom.Rd
man/H2.Rd
man/POUMMIsADevRelease.Rd
man/specPOUMM.Rd
man/plot.POUMM.Rd
man/nodeTimes.Rd
man/vignetteCachedResults.Rd
man/nobs.POUMM.Rd
man/statistics.Rd
man/loglik_abc_g0_g0Prior.Rd
man/simulateTrait.Rd
man/validateSpecPOUMM.Rd
man/covVTipsGivenTreePOUMM.Rd
man/OU.Rd
man/POUMM.Rd
man/mcmcPOUMMGivenPriorTreeVTips.Rd
man/rTrajectoryOUDef.Rd
man/rTrajectoryOU.Rd
man/plot.summary.POUMM.Rd
man/simulatePOUMMLikelihoodMainLoop.Rd
man/fitted.POUMM.Rd
man/dVNodesGivenTreePOUMM.Rd
man/validateZTree.Rd
man/likPOUMMGivenTreeVTipsC.Rd
man/pruneTree.Rd
man/gPOUMM.Rd
