Files in POUMM

The Phylogenetic Ornstein-Uhlenbeck Mixed Model

NEWS.md

MD5

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

src/AbcPOUMM.h

src/SPLITT.h

src/Makevars

src/Rcpp.cpp

data/vignetteCachedResults.rda

R/fitPOUMM.R R/POUMM.R R/likPOUMM.R R/utilities.R R/summaryPOUMM.R R/vignetteCachedResults.R R/specPOUMM.R R/paramsPOUMM.R vignettes/UserGuide.Rmd vignettes/InterpretingPOUMM.Rmd

vignettes/REFERENCES.bib

man/simulatePOUMMLikelihoodMainLoop.Rd man/covVTipsGivenTreePOUMM.Rd man/vignetteCachedResults.Rd man/covFunPOUMM.Rd man/likPOUMMGivenTreeVTips.Rd man/likPOUMMGivenTreeVTipsC.Rd man/POUMM.Rd man/PhylogeneticH2.Rd man/summary.POUMM.Rd man/chld.Rd man/maxLikPOUMMGivenTreeVTips.Rd man/plot.summary.POUMM.Rd man/OU.Rd man/gPOUMM.Rd man/POUMMIsADevRelease.Rd man/H2.Rd man/fitted.POUMM.Rd man/coef.POUMM.Rd man/rVNodesGivenTreePOUMM.Rd man/validateSpecPOUMM.Rd man/validateZTree.Rd man/pruneTree.Rd man/nodeTimes.Rd man/rTrajectoryOU.Rd man/statistics.Rd man/covHPDFunPOUMM.Rd man/plot.POUMM.Rd man/simulateTrait.Rd man/analyseMCMCs.Rd man/rTrajectoryOUDef.Rd man/nobs.POUMM.Rd man/mcmcPOUMMGivenPriorTreeVTips.Rd man/covPOUMM.Rd man/dVNodesGivenTreePOUMM.Rd man/loglik_abc_g0_g0Prior.Rd man/edgesFrom.Rd man/specPOUMM.Rd man/logLik.POUMM.Rd man/residuals.POUMM.Rd tests/test-all.R tests/testthat/test-parameters.R tests/testthat/test-fit.R tests/testthat/test-specify.R tests/testthat/test-lik.R

inst/CITATION

inst/REFERENCES.bib

inst/doc/UserGuide.html

inst/doc/InterpretingPOUMM.R inst/doc/UserGuide.Rmd

inst/doc/InterpretingPOUMM.html

inst/doc/UserGuide.R inst/doc/InterpretingPOUMM.Rmd

POUMM documentation built on Oct. 27, 2020, 5:06 p.m.