go_back_to_original_process: Scale the parameters back to the original process

In PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM

Scale the parameters back to the original process

Description

go_back_to_original_process takes the inferred parameters with a BM on a rescaled tree, and gives back the equivalent parameters of the OU on the original process.

Usage

go_back_to_original_process(
  phy_original,
  known.selection.strength,
  sBM_variance,
  params
)

Arguments

phy_original:	the original phylogenetic tree
known.selection.strength:	the known selection strength of the original OU.
sBM_variance:	boolean. Is the root random ?
params:	the inferred parameters of the BM on the re-scaled tree.

Value

params_scOU the equivalent parameters of the OU on the original tree.

PhylogeneticEM documentation built on Aug. 31, 2022, 9:16 a.m.