residuals.PhyloEM: Residuals of a fitted object
In PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
residuals.PhyloEM R Documentation
Residuals of a fitted object
Description
residuals computes the residuals of some parameters.
Usage
## S3 method for class 'PhyloEM'
residuals(object, ...)
Arguments
object
an object of class params_process or PhyloEM.
trait, and each column is a tip. The column names are checked against the
tip names of the tree.
incidence.matrix.full. Can be specified to avoid extra computations.
...
for a PhyloEM object, further arguments to be passed on to
params_process.PhyloEM (to choose which parameters to extract from
the results, see documentation of this function).
Value
The log likelihood of the data with the provided parameters on the tree.
See Also
params_process, PhyloEM
PhylogeneticEM documentation built on Aug. 31, 2022, 9:16 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| residuals.PhyloEM | R Documentation |
Residuals of a fitted object
Description
residuals computes the residuals of some parameters.
Usage
## S3 method for class 'PhyloEM' residuals(object, ...)
Arguments
object |
an object of class |
... |
for a |
Value
The log likelihood of the data with the provided parameters on the tree.
See Also
params_process, PhyloEM
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.