segmentation.OU.specialCase.same_shifts: Segmentation in the OU special case, conserving the same...
In PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM

segmentation.OU.specialCase.same_shifts

R Documentation

Segmentation in the OU special case, conserving the same shifts position.

segmentation.OU.specialCase.same_shifts keeps the same shifts position, and optimize the sum of costs using function best_scenario

segmentation.OU.specialCase.same_shifts(phylo, shifts_old, D, Xp, ...)

`phylo`	a phylogenetic tree
`shifts_old`	the previous list of shifts (only position is used)

This is the best move if keeping the previous shifts positions.

List containing : beta_0 : the optimal value at the root shifts : list containing the computed tau and delta costs : vector of costs

PhylogeneticEM documentation built on June 22, 2024, 6:46 p.m.

PhylogeneticEM index

Note that we can't provide technical support on individual packages. You should contact the package authors for that.