Nothing
test.s3methods.rendoboots <- function(res.model, input.form, function.std.data, req.df,
full.coefs){
input.form <- Formula::as.Formula(input.form)
# Rendo base part (because inherit from it)
.test.s3methods.rendobase(res.model=res.model, input.form=input.form, function.std.data=function.std.data,
req.df=req.df,full.coefs=full.coefs)
# rendo.boots specific parts
test_that("confint stops if too many NAs in one parameter", {
boots.params.bck <- res.model$boots.params
# All NAs fails
num.boots.used <- ncol(res.model$boots.params)
res.model$boots.params[1, ] <- rep(x = NA_real_, times=num.boots.used)
expect_error(confint(res.model), regexp = "Not enough bootstraps")
res.model$boots.params <- boots.params.bck # write back needed again
# 85% NAs fails for 0.95 level
res.model$boots.params[1,seq(num.boots.used*0.85)] <- rep(NA_real_, num.boots.used*0.85)
expect_error(confint(res.model, level = 0.95), regexp = "Not enough bootstraps")
res.model$boots.params <- boots.params.bck # write back if needed later on
# 10% NAs works with warning
res.model$boots.params[1,seq(num.boots.used*0.1)] <- rep(NA_real_, num.boots.used*0.1)
expect_warning(confint(res.model), regexp = "Confidence intervals might be unreliable")
# summary also works but with warning
expect_warning(summary(res.model), regexp = "Confidence intervals might be unreliable")
res.model$boots.params <- boots.params.bck # write back if needed later on
})
test_that("rendo.boots object structure", {
expect_is(res.model, "rendo.boots")
expect_true(is.list(res.model))
expect_true("boots.params" %in% names(res.model))
})
test_that("summary() object structure, boots part", {
expect_silent(res.sum <- summary(res.model))
expect_is(res.sum, "summary.rendo.boots")
expect_true(is.list(res.sum))
expect_true(all(c("call", "names.main.coefs", "coefficients", "num.boots", "vcov") %in%
names(res.sum)))
expect_is(res.sum$call, "call")
expect_is(res.sum$names.main.coefs, "character")
expect_is(res.sum$num.boots, "integer")
expect_is(res.sum$coefficients, "matrix")
expect_is(res.sum$vcov, "matrix")
})
test_that("boots summary() coef structure", {
expect_silent(res.sum <- summary(res.model))
expect_silent(res.cf <- coef(res.sum))
expect_true(all( c("Point Estimate", "Boots SE", "Lower Boots CI (95%)", "Upper Boots CI (95%)")
%in% colnames(res.cf)))
expect_true(all(rownames(res.cf) == names(coef(res.model))))
if(res.sum$num.boots >=100)
expect_false(anyNA(coef(res.sum)))
else
expect_true(anyNA(coef(res.sum)))
})
test_that("boots summary() prints", {
expect_silent(res.sum <- summary(res.model))
expect_output(show(res.sum))
expect_output(res.print <- print(res.sum))
expect_equal(res.print, res.sum)
})
}
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