validate.genes.present: Validate genes present
In RVA: RNAseq Visualization Automation
Description
Usage
Arguments
References
View source: R/validate.input.R
Description
Checks how many of the gene id's in the dataset are there in the geneset.
Usage
1
validate.genes.present(data.genes, geneset)
Arguments
data.genes
The gene id's.
geneset
a summary statistic table contain the genes want to be highlighted, the gene name format (in row names)
needs to be consistent to the main summary statistics table). For example, this summary statistics
table coulb be the output summary statistics table from Disease vs Healthy comparison (Only contain
the subsetted significant genes want to be highlighted).
References
Xingpeng Li, Tatiana Gelaf Romer & Siddhartha Pachhai RVA - RNAseq Visualization Automation tool.
RVA documentation built on Nov. 2, 2021, 1:06 a.m.
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Description Usage Arguments References
View source: R/validate.input.R
Description
Checks how many of the gene id's in the dataset are there in the geneset.
Usage
1 | validate.genes.present(data.genes, geneset)
|
Arguments
data.genes |
The gene id's. |
geneset |
a summary statistic table contain the genes want to be highlighted, the gene name format (in row names) needs to be consistent to the main summary statistics table). For example, this summary statistics table coulb be the output summary statistics table from Disease vs Healthy comparison (Only contain the subsetted significant genes want to be highlighted). |
References
Xingpeng Li, Tatiana Gelaf Romer & Siddhartha Pachhai RVA - RNAseq Visualization Automation tool.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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