Description Usage Arguments Value Author(s)
View source: R/Estim.H0.ASKAT.R
Estimation of the variance components under the null model using the ASKAT method
1  Estim.H0.ASKAT(y, X, S, U)

y 
Vector of phenotype values 
X 
A matrix of covariates, including intercept. 
S 
Matrix obtained from spectral decomposition of the relationship matrix: Φ = U S U^T. 
U 
Matrix obtained from spectral decomposition of the relationship matrix: Φ = U S U^T. 
A vector with the following values:
s.e
: variance component due to the error term (residuals)
s.g
: variance component due to the polygenic residual
(polygenic background)
beta
: the estimate of the effects of the covariate (if
there are some in the data)
Karim Oualkacha
M'Hamed Lajmi LakhalChaieb
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