This functions prepares for running the
function. The output of this function can be passed to that one.
Preparation.hap.perm(pedigree, generation.id, indices.haplotypes1, indices.haplotypes2)
data frame with pedigree information in linkage
format (four columns: family ID, individual ID, father ID, mother
ID). For example the first for columns of a Plink
a vector of length(sample size) which
indicates if the subject is founder (
a list of vectors with indices of various parts of the pedigree.
M'Hamed Lajmi Lakhal-Chaieb
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