Files in RZooRoH
Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes
MD5
NAMESPACE
DESCRIPTION
R/RZooRoH-package.R
R/prob_emission.R
R/data.R
R/lib_mixkl.R
R/zplot_prophbd.R
R/zooplot_segments.R
R/zookin_accessor.R
R/lib_kl.R
R/zookin.R
R/zplot_individual.R
R/zplot_vertical.R
R/zooroh_accessor.R
R/param_function.R
R/zooroh_model.R
R/zooroh.R
R/read_zdata.R
src/zoosumlayerViterbi.f90
src/RZooRoH_init.c
src/zoosumlayerFB.f90
src/Freqem_GP.f90
src/zoolayerViterbi.f90
src/zoosumlayerlik2.f90
src/zoosumlayerFB2.f90
src/zoolayerFB.f90
src/zoolayerlik.f90
src/zoosumlayerlik.f90
src/Freqem_AD.f90
src/Freqem_PL.f90
src/zoosumlayerViterbi2.f90
inst/CITATION
inst/doc/zooroh-vignette.R
inst/doc/zooroh-vignette.pdf
inst/doc/zooroh-vignette.Rmd
inst/exdata/Ref22_EX.haps
inst/exdata/typsfrq.txt
inst/exdata/BBB_NMP_ad_subset.txt
inst/exdata/BBB_NMP_subset.txt
inst/exdata/TAF_phased_ex.vcf
inst/exdata/typs.txt
inst/exdata/BBB_NMP_GP_subset.txt
inst/exdata/genosim.txt
inst/exdata/genoex.txt
inst/exdata/BBB_NMP_pl_subset.txt
inst/exdata/BBB_PE_gt_subset.txt
inst/exdata/BBB_samples.txt
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test1.R
tests/testthat/test2.R
vignettes/BBB_hdbseg_densities.pdf
vignettes/biomed-central.csl
vignettes/Effect_density_error_lowfoldII.pdf
vignettes/genetics.csl
vignettes/Figure2.pdf
vignettes/rzoo.bib
vignettes/zooroh-vignette.Rmd
vignettes/Fig4hb_barplot_filteredRR.pdf
vignettes/Figure1.pdf
data/BBB_samples.RData
data/Local_IBD.RData
data/wilt_mix10l.RData
data/kintaf_mix4l.RData
data/BBB_NMP_GP_subset.RData
data/typsfrq.RData
data/BBB_PE_gt_subset.RData
data/genosim.RData
data/BBB_NMP_pl_subset.RData
data/soay_mix10l.RData
data/genoex.RData
data/BBB_NMP_ad_subset.RData
data/rara_mix10l.RData
data/typs.RData
man/zoodata.Rd
man/BBB_PE_gt_subset.Rd
man/kintaf_mix4l.Rd
man/typsfrq.Rd
man/typs.Rd
man/realized.Rd
man/wilt_mix10l.Rd
man/BBB_NMP_pl_subset.Rd
man/hbd2.Rd
man/probhbd.Rd
man/update_zres.Rd
man/RZooRoH-package.Rd
man/BBB_NMP_ad_subset.Rd
man/rara_mix10l.Rd
man/rohbd.Rd
man/predhbd.Rd
man/merge_zres.Rd
man/zoomodel.Rd
man/cumhbd.Rd
man/zooplot_partitioning.Rd
man/soay_mix10l.Rd
man/zooplot_hbdseg.Rd
man/zookin.Rd
man/zooplot_individuals.Rd
man/zoorun.Rd
man/cumkin.Rd
man/map1.Rd
man/genosim.Rd
man/zooplot_prophbd.Rd
man/genoex.Rd
man/BBB_samples.Rd
man/hbd1.Rd
man/BBB_NMP_GP_subset.Rd
