GnomADgenes: GnomADgenes dataset
In Ravages: Rare Variant Analysis and Genetic Simulations
GnomADgenes R Documentation
GnomADgenes dataset
Description
This dataframe contains variants from the GnomAD database with MAF values in the Non-Finnish European (NFE)
and their consequences from VEP with each associated gene in build version 37.
Usage
data(GnomADgenes)
Format
GnomADgenes is a dataframe with five columns:
- chr
The chromosome of the variant
- pos
The position of the variant
- consequence
The functionnal consequence of the variant predicted by Variant Effect Predictor (VEP)
- gene
The gene associated to each variant predicted by VEP
- maf
The MAF of the variant in the NFE population
Source
The data were obtained from the GnomAD website (see http://gnomad.broadinstitute.org/) and the VEP website (see https://www.ensembl.org/info/docs/tools/vep/).
Ravages documentation built on April 1, 2023, 12:08 a.m.
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| GnomADgenes | R Documentation |
GnomADgenes dataset
Description
This dataframe contains variants from the GnomAD database with MAF values in the Non-Finnish European (NFE) and their consequences from VEP with each associated gene in build version 37.
Usage
data(GnomADgenes)Format
GnomADgenes is a dataframe with five columns:
- chr
The chromosome of the variant
- pos
The position of the variant
- consequence
The functionnal consequence of the variant predicted by Variant Effect Predictor (VEP)
- gene
The gene associated to each variant predicted by VEP
- maf
The MAF of the variant in the NFE population
Source
The data were obtained from the GnomAD website (see http://gnomad.broadinstitute.org/) and the VEP website (see https://www.ensembl.org/info/docs/tools/vep/).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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