subregions.LCT: Exemple of functional categories

In Ravages: Rare Variant Analysis and Genetic Simulations

Exemple of functional categories

Description

Example of arbitrary functional categories (coding or regulatory) in the LCT locus (bed format, GRCH37). "Coding" corresponds to coding parts of the exons and "Regulatory" corresponds to everything that falls outside these coding regions.

Data contain the Chr, the Start position, the End position and the Name of all functional regions in the LCT locus.

Format

The data contain one dataframe with four columns:

Chr

The chromosome of the gene

Start

The start position of the functional region (0-based)

End

The end position of the functional region (1-based)

Name

The name of the gene

See Also

set.genomic.region.subregion, burden.subscores

Ravages documentation built on April 1, 2023, 12:08 a.m.