LCT.haplotypes | R Documentation |
These data contain the haplotype matrix LCT.hap
(5008 haplotypes) of the 2004 individuals from the 1000 Genomes data for a ~300kb segment containing the Lactase gene.
Information about individuals (sex, population and super population) is present in LCT.sample
, and information about snps is available in LCT.snps
.
data(LCT.haplotypes)
Three data objects are present in LCT.haplotypes
:
LCT.hap
A matrix of haplotypes
LCT.sample
A data frame with information on individuals (sex, population, super.population)
LCT.snps
A data frame with information on snps (chr, id, dist, pos, A1, A2)
Data were obtained from the 1000 Genomes Project.
McVean et al, 2012, An integrated map of genetic variation from 1,092 human genomes, Nature 491, 56-65 doi:10.1038/nature11632
LCT.matrix
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.