Man pages for RbioRXN
Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction Data

build.subtableBuild sub-table for the entries with multiple values
check.mass.balanceCheck given biochemical reaction is mass-balanced
exampleRbiorxn example data
get.chebi.allDownload and parse current ChEBI
get.kegg.allDownload current KEGG REACTION and KEGG COMPOUND database...
get.kegg.byIdDownload given KEGG REACTION entry using KEGGREST package
get.metacyc.allDownload current MetaCyc via BioCyc Web Services
get.metacyc.reaction.byIdDownload given MetaCyc reaction via BioCyc web services
get.rhea.allDownload current Rhea in data.frame() object
get.rhea.byCompoundDownload Rhea reaction by compound
get.rhea.byIdDownload Rhea by Rhea ID
get.unipathway.allDownload current Unipathway
instantiate.metacycInstantiate MetaCyc generic reaction
instantiate.rheaInstantiate Rhea generic reaction
is.generic.metacycCheck given reaction is generic reaction
is.generic.rheaCheck given reaction is generic reaction
parse.metacyc.compoundParse MetaCyc compound data (compounds.dat in attribute-value...
parse.metacyc.reactionParse MetaCyc reaction data (reactions.dat in attribute-value...
RbioRXN-packageRbioRXN - Process Rhea, KEGG, MetaCyc, Unipathway Biochemical...
RbioRXN documentation built on May 29, 2017, 10:56 a.m.