Man pages for RbioRXN
Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction Data
| build.subtable | Build sub-table for the entries with multiple values |
| check.mass.balance | Check given biochemical reaction is mass-balanced |
| example | Rbiorxn example data |
| get.chebi.all | Download and parse current ChEBI |
| get.kegg.all | Download current KEGG REACTION and KEGG COMPOUND database... |
| get.kegg.byId | Download given KEGG REACTION entry using KEGGREST package |
| get.metacyc.all | Download current MetaCyc via BioCyc Web Services |
| get.metacyc.reaction.byId | Download given MetaCyc reaction via BioCyc web services |
| get.rhea.all | Download current Rhea in data.frame() object |
| get.rhea.byCompound | Download Rhea reaction by compound |
| get.rhea.byId | Download Rhea by Rhea ID |
| get.unipathway.all | Download current Unipathway |
| instantiate.metacyc | Instantiate MetaCyc generic reaction |
| instantiate.rhea | Instantiate Rhea generic reaction |
| is.generic.metacyc | Check given reaction is generic reaction |
| is.generic.rhea | Check given reaction is generic reaction |
| parse.metacyc.compound | Parse MetaCyc compound data (compounds.dat in attribute-value... |
| parse.metacyc.reaction | Parse MetaCyc reaction data (reactions.dat in attribute-value... |
| RbioRXN-package | RbioRXN - Process Rhea, KEGG, MetaCyc, Unipathway Biochemical... |
