API for SDMtune
Species Distribution Model Selection
| Global functions | |
|---|---|
| .args_name | Source code |
| .breed | Source code |
| .categorical | Source code |
| .check_args | Source code |
| .check_optimize_args | Source code |
| .compute_auc | Source code |
| .compute_permutation | Source code |
| .compute_report_jk | Source code |
| .compute_report_thresholds | Source code |
| .compute_report_variable_importance | Source code |
| .compute_tss | Source code |
| .convert_folds | Source code |
| .create_chart | Source code |
| .create_model_from_settings | Source code |
| .create_plot | Source code |
| .create_sdmtune_output | Source code |
| .create_sdmtune_result | Source code |
| .fetch_var_imp | Source code |
| .get_absence | Source code |
| .get_fc_args | Source code |
| .get_footer | Source code |
| .get_hypers_grid | Source code |
| .get_lambdas | Source code |
| .get_method | Source code |
| .get_metric | Source code |
| .get_metric_label | Source code |
| .get_model_class | Source code |
| .get_model_fc | Source code |
| .get_model_reg | Source code |
| .get_plot_data | Source code |
| .get_presence | Source code |
| .get_rank_index | Source code |
| .get_sdmtune_colnames | Source code |
| .get_total_models | Source code |
| .get_train_args | Source code |
| .hinge | Source code |
| .make_args | Source code |
| .make_report_prediction | Source code |
| .onAttach | Source code |
| .plot_report_response_curves | Source code |
| .plot_report_roc | Source code |
| .raster_error | Source code |
| .render_script | Source code |
| .rev_hinge | Source code |
| .save_report_files | Source code |
| .show_chart | Source code |
| .start_server | Source code |
| .subset_swd | Source code |
| .threshold | Source code |
| .update_data | Source code |
| .write_report_model_settings | Source code |
| ANN | Man page |
| ANN-class | Man page |
| BRT | Man page |
| BRT-class | Man page |
| Maxent | Man page |
| Maxent-class | Man page |
| Maxnet | Man page |
| Maxnet-class | Man page |
| RF | Man page |
| RF-class | Man page |
| SDMmodel | Man page |
| SDMmodel-class | Man page |
| SDMmodel2MaxEnt | Man page Source code |
| SDMmodelCV | Man page |
| SDMmodelCV-class | Man page |
| SDMtune | Man page |
| SDMtune-class | Man page |
| SDMtune-package | Man page |
| SWD | Man page |
| SWD-class | Man page |
| addSamplesToBg | Man page Source code |
| aicc | Man page Source code |
| auc | Man page Source code |
| checkMaxentInstallation | Man page Source code |
| combineCV | Man page Source code |
| confMatrix | Man page Source code |
| corVar | Man page Source code |
| doJk | Man page Source code |
| getTunableArgs | Man page Source code |
| gridSearch | Man page Source code |
| maxentTh | Man page Source code |
| maxentVarImp | Man page Source code |
| mergeSWD | Man page Source code |
| modelReport | Man page Source code |
| optimizeModel | Man page Source code |
| plot,SDMtune,missing-method | Man page |
| plotCor | Man page Source code |
| plotJk | Man page Source code |
| plotPA | Man page Source code |
| plotPred | Man page Source code |
| plotROC | Man page Source code |
| plotResponse | Man page Source code |
| plotVarImp | Man page Source code |
| predict,ANN-method | Man page |
| predict,BRT-method | Man page |
| predict,Maxent-method | Man page |
| predict,Maxnet-method | Man page |
| predict,RF-method | Man page |
| predict,SDMmodel-method | Man page |
| predict,SDMmodelCV-method | Man page |
| prepareSWD | Man page Source code |
| randomFolds | Man page Source code |
| randomSearch | Man page Source code |
| reduceVar | Man page Source code |
| scaleClamp | Source code |
| show,ANN-method | Man page |
| show,BRT-method | Man page |
| show,Maxent-method | Man page |
| show,Maxnet-method | Man page |
| show,RF-method | Man page |
| show,SDMmodel-method | Man page |
| show,SDMmodelCV-method | Man page |
| show,SDMtune-method | Man page |
| show,SWD-method | Man page |
| swd2csv | Man page Source code |
| thinData | Man page Source code |
| thresholds | Man page Source code |
| train | Man page Source code |
| trainANN | Source code |
| trainBRT | Source code |
| trainMaxent | Source code |
| trainMaxnet | Source code |
| trainRF | Source code |
| trainValTest | Man page Source code |
| tss | Man page Source code |
| varImp | Man page Source code |
| varSel | Man page Source code |
| virtualSp | Man page |
