The p x p target Cor is computed from the n x p data matrix. It it a modified version of target G. In particular, it tests the correlations (with a significance level of 0.05) and sets the non-significant correlations to zero before the mean correlation r is computed.
A n \times p data matrix.
A list of genes obtained using the database KEGG, where each entry itself is a list of pathway names this genes belongs to. If a gene does not belong to any gene functional group, the entry is NA.
A p x p matrix.
Monika Jelizarow and Vincent Guillemot
J. Schaefer and K. Strimmer, 2005. A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics. Statist. Appl. Genet. Mol. Biol. 4:32.
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