Create a tar archive.
tar(tarfile, files = NULL, compression = c("none", "gzip", "bzip2", "xz"), compression_level = 6, tar = Sys.getenv("tar"), extra_flags = "")
The pathname of the tar file: tilde expansion (see
A character vector of filepaths to be archived: the default is to archive all files under the current directory.
character string giving the type of compression to be used (default none). Can be abbreviated.
integer: the level of compression. Only used for the internal method.
character string: the path to the command to be used. If
the command itself contains spaces it needs to be quoted (e.g., by
Any extra flags for an external
This is either a wrapper for a
tar command or uses an
internal implementation in R. The latter is used if
is a connection or if the argument
"" (the ‘factory-fresh’ default). Note that whereas
Unix-alike versions of R set the environment variable TAR, its
value is not the default for this function.
extra_flags is passed to an external
so is platform-dependent. Possibly useful values include -h
(follow symbolic links, also -L on some platforms),
--acls, --exclude-backups, --exclude-vcs (and
similar) and on Windows --force-local (so drives can be
included in filepaths: however, this is the default for the
tar). For GNU
--format=ustar forces a more portable format. (The default is
set at compilation and will be shown at the end of the output from
tar --help: for version 1.30 ‘out-of-the-box’ it is
--format=gnu, but the manual says the intention is to change
to --format=posix which is the same as
it was never part of the POSIX standard for
tar and should
not be used.)
bsdtar, --format=ustar is more
portable than the default.
One issue which can cause an external command to fail is a command
line too long for the system shell: as from R 3.5.0 this is worked
around if the external command is detected to be GNU
files = '.' will usually not work with an external
tar as that would expand the list of files after
tarfile is created. (It does work with the default internal
The return code from
0 for the internal
The ‘tar’ format no longer has an agreed standard!
‘Unix Standard Tar’ was part of POSIX 1003.1:1998 but has been
removed in favour of
pax, and in any case many common
implementations diverged from the former standard.
Many R platforms use a version of GNU
Rtools on Windows), but the behaviour seems to be changed
with each version. macOS >= 10.6 and FreeBSD use
from the libarchive project (but for macOS a version from 2017 or
earlier, 2010 for High Sierra), and commercial Unixes will have their
bsdtar is available for many other platforms:
macOS up to at least 10.9 had GNU
and other platforms, e.g. Solaris, have it as
on a Unix-alike
configure will try
Known problems arise from
The handling of file paths of more than 100 bytes. These were
unsupported in early versions of
tar, and supported in one
way by POSIX
tar and in another by GNU
yet another by the POSIX
pax command which
tar programs often support. The internal
implementation warns on paths of more than 100 bytes,
uses the ‘ustar’ way from the 1998 POSIX
standard which supports up to 256 bytes (depending on the path: in
particular the final component is limited to 100 bytes) if possible,
otherwise the GNU way (which is widely supported, including by
Most formats do not record the encoding of file paths.
tar was developed on an OS that used
hard links, and physical files that were referred to more than once
in the list of files to be included were included only once, the
remaining instances being added as links. Later a means to include
symbolic links was added. The internal implementation supports
symbolic links (on OSes that support them), only. Of course, the
question arises as to how links should be unpacked on OSes that do
not support them: for regular files file copies can be used.
Names of links in the ‘ustar’ format are restricted to 100
bytes. There is an GNU extension for arbitrarily long link names,
bsdtar ignores it. The internal method uses the
GNU extension, with a warning.
Header fields, in particular the padding to be used when fields are not full or not used. POSIX did define the correct behaviour but commonly used implementations did (and still do) not comply.
File sizes. The ‘ustar’ format is restricted to 8GB per (uncompressed) file.
For portability, avoid file paths of more than 100 bytes and all links (especially hard links and symbolic links to directories).
The internal implementation writes only the blocks of 512 bytes
required (including trailing blocks of nuls), unlike GNU
which by default pads with nul to a multiple of 20 blocks
(10KB). Implementations which pad differ on whether the block padding
should occur before or after compression (or both): padding was
designed for improved performance on physical tape drives.
The ‘ustar’ format records file modification times to a resolution of 1 second: on file systems with higher resolution it is conventional to discard fractional seconds.
When an external
tar command is used, compressing the tar
archive requires that
tar supports the -z,
-j or -J flag, and may require the appropriate
xz) to be
available. For GNU
tar, further compression programs can be
specified by e.g.
extra_flags = "-I lz4".
Some versions of
bsdtar accept options such as
--lz4, --lzop and --lrzip or an external
--use-compress-program lz4: these could
be supplied in
NetBSD prior to 8.0 used flag --xz rather than -J,
so this should be used via
extra_flags = "--xz" rather
compression = "xz". The commands from OpenBSD and the
Heirloom Toolchest are not documented to support
tar programs in commercial Unixen such as AIX and
Solaris do not support compression.
For users of macOS. Apple's file systems have a legacy concept of
‘resource forks’ dating from classic Mac OS and rarely used
nowadays. Apple's version of
tar stores these as separate
files in the tarball with names prefixed by ‘._’, and unpacks
such files into resource forks (if possible): other ways of unpacking
untar in R) unpack them as separate files.
tar is set to the command
tar on macOS,
environment variable COPYFILE_DISABLE=1 is set, which for the
system version of
tar prevents these separate files being
included in the tarball.
for the way the POSIX utility
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