API for SerolyzeR
Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data
| Global functions | |
|---|---|
| Model | Man page |
| Plate | Man page |
| PlateBuilder | Man page |
| as.data.frame.Plate | Source code |
| assay_info_parser | Source code |
| batch_metadata_parser | Source code |
| calibration_metadata_parser | Source code |
| check_data | Source code |
| check_key_parser | Source code |
| check_path_equal | Man page Source code |
| clamp | Man page Source code |
| convert_dilutions_to_numeric | Man page Source code |
| crc32_parser | Source code |
| create_standard_curve_model_analyte | Man page Source code |
| create_vector_without_holes | Man page Source code |
| csv_table_parser | Source code |
| detect_mba_format | Man page Source code |
| dilution_to_rau | Man page Source code |
| eof_parser | Source code |
| extract_dilution_from_names | Man page Source code |
| extract_dilutions_from_layout | Man page Source code |
| extract_sample_names_from_layout | Man page Source code |
| filter_list | Source code |
| find_analyte_names | Source code |
| find_layout_file | Man page Source code |
| format_dilutions | Man page Source code |
| format_xlab | Man page Source code |
| format_ylab | Man page Source code |
| generate_levey_jennings_report | Man page Source code |
| generate_plate_report | Man page Source code |
| get_join_value | Man page Source code |
| get_location_matrix | Man page Source code |
| get_nmfi | Man page Source code |
| get_output_dir | Man page Source code |
| handle_datetime | Man page Source code |
| handle_high_dose_hook | Man page Source code |
| is.decreasing | Man page Source code |
| is.scalar | Man page Source code |
| is.str.number | Man page Source code |
| is_dilution | Source code |
| is_line_blank | Source code |
| is_mba_data_file | Man page Source code |
| is_mba_format | Man page Source code |
| is_outlier | Man page Source code |
| is_the_end_of_csv_section | Source code |
| is_valid_data_type | Man page Source code |
| is_valid_normalisation_type | Source code |
| is_valid_sample_type | Man page Source code |
| join_parsers | Source code |
| key_value_pairs_parser | Source code |
| key_value_parser | Source code |
| make_optional | Source code |
| match_any_parser | Source code |
| merge_dataframes | Man page Source code |
| named_key_value_pairs_parser | Source code |
| parse_xponent_locations | Source code |
| parsing_error | Source code |
| plot_counts | Man page Source code |
| plot_layout | Man page Source code |
| plot_levey_jennings | Man page Source code |
| plot_mfi_for_analyte | Man page Source code |
| plot_plate | Man page Source code |
| plot_standard_curve_analyte | Man page Source code |
| plot_standard_curve_analyte_with_model | Man page Source code |
| plot_standard_curve_stacked | Man page Source code |
| plot_standard_curve_thumbnail | Man page Source code |
| postprocess_intelliflex | Source code |
| postprocess_xponent | Source code |
| predict.Model | Man page Source code |
| process_dir | Man page Source code |
| process_file | Man page Source code |
| process_plate | Man page Source code |
| program_build_data_parser | Source code |
| program_metadata_parser | Source code |
| read_intelliflex_format | Man page Source code |
| read_layout_data | Man page Source code |
| read_location_data_csv | Source code |
| read_location_data_xlsx | Source code |
| read_luminex_data | Man page Source code |
| read_until_parser | Source code |
| read_xponent_format | Man page Source code |
| remove_empty_lists | Man page Source code |
| remove_non_analyte_columns | Source code |
| rename_parser_output | Source code |
| repeat_parser | Source code |
| results_block_parser | Source code |
| select_columns | Man page Source code |
| skip_blanks_parser | Source code |
| sort_list_by | Man page Source code |
| summary.Plate | Source code |
| translate_sample_names_to_sample_types | Man page Source code |
| validate_filepath_and_output_dir | Man page Source code |
| vectorize_csv_line | Source code |
| verbose_cat | Man page Source code |
| verify_character_join | Man page Source code |
| verify_numeric_join | Man page Source code |
| wrap_parser_output | Source code |
