assign_shared_feature: assign_shared_feature

In SiFINeT: Single Cell Feature Identification with Network Topology

assign_shared_feature

Description

The function assigns non-unique candidate feature genes as shared feature genes into unique feature gene sets

Usage

assign_shared_feature(so, min_edge_prop = 0.4)

Arguments

so	a SiFINeT object
min_edge_prop	minimum proportion of edges between a gene and a unique feature gene set for the new gene to be assigned to the set

Details

Candidate feature genes that are not chosen as unique feature genes would be reconsidered as shared feature genes. A non-unique candidate feature gene would be assigned to a unique feature gene group if it is connected to more than min_edge_prop of the unique genes in the group.

Value

SiFINeT object with shared feature genes in featureset updated.

SiFINeT documentation built on April 3, 2025, 9:30 p.m.