enrich_feature_set: enrich_feature_set

In SiFINeT: Single Cell Feature Identification with Network Topology

enrich_feature_set

Description

The function chooses genes that are not found to be feature genes as enriched feature genes and assigns them into unique+shared feature gene sets

Usage

enrich_feature_set(so, min_edge_prop = 0.9)

Arguments

so	a SiFINeT object
min_edge_prop	minimum proportion of edges between a gene and a unique+shared feature gene set for the new feature to be assigned to the set

Details

Genes that are not selected as feature genes would be added in the enriched section of the feature gene set if they are connected with more than min_edge_prop of the unique and shared feature genes in each of the feature gene group.

Value

SiFINeT object with enriched feature genes in geneset updated.

SiFINeT documentation built on April 3, 2025, 9:30 p.m.