identify_pathwaySNVs: Identify SNVs located in a specified pathway
In SimRVSequences: Simulate Genetic Sequence Data for Pedigrees
Description
Usage
Arguments
Value
View source: R/identifyPathwaySNVs.R
Description
Identify SNVs located in a specified pathway
Usage
1
identify_pathwaySNVs(markerDF, pathwayDF)
Arguments
markerDF
A data frame containing SNV data. See details.
pathwayDF
A data frame containing pathway data. See details.
Value
A dataframe with the same format as markerDF, but with a variable pathwaySNV marked FALSE for all variants located outside exons in pathwayDF, or with derived allele frequency greater than carrier_prob.
SimRVSequences documentation built on July 1, 2020, 6:03 p.m.
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Description Usage Arguments Value
View source: R/identifyPathwaySNVs.R
Description
Identify SNVs located in a specified pathway
Usage
1 | identify_pathwaySNVs(markerDF, pathwayDF)
|
Arguments
markerDF |
A data frame containing SNV data. See details. |
pathwayDF |
A data frame containing pathway data. See details. |
Value
A dataframe with the same format as markerDF, but with a variable pathwaySNV marked FALSE for all variants located outside exons in pathwayDF, or with derived allele frequency greater than carrier_prob.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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