Description Usage Arguments Details Value Author(s) See Also Examples
plot
method for class mcmcSTmodel
.
1 2 |
x |
|
y |
Type of plot, options are |
add |
Add to existing plot using |
main |
Parameter passed as |
... |
Additional parameters passed to |
Plots results from MCMC.STmodel
. Either parameter paths or the
log-likelihood for the mcmc simulations.
Nothing
Johan Lindstrom
Other mcmcSTmodel methods: MCMC.STmodel
,
density.mcmcSTmodel
,
plot.density.mcmcSTmodel
,
print.mcmcSTmodel
,
print.summary.mcmcSTmodel
,
summary.mcmcSTmodel
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 | ##load MCMC results instead
data(MCMC.mesa.model)
##plot the log-likelihood
plot(MCMC.mesa.model, ylab="", xlab="", type="l")
##and MCMC tracks for four of the parameters
par(mfrow=c(4,1),mar=c(2,2,2.5,.5))
for(i in c(4,9,13,15)){
plot(MCMC.mesa.model, i, ylab="", xlab="", type="l")
}
##or by name
par(mfrow=c(1,1),mar=c(2,2,2.5,.5))
plot(MCMC.mesa.model, "nu.log.range.exp", ylab="", xlab="", type="l",
main="all range estimates", ylim=c(-14,10))
##all ranges in one plot
plot(MCMC.mesa.model, "log.range.const.exp", add=TRUE, col=2)
plot(MCMC.mesa.model, "log.range.V1.exp", add=TRUE, col=3)
plot(MCMC.mesa.model, "log.range.V2.exp", add=TRUE, col=4)
|
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