Man pages for StrathE2E2
End-to-End Marine Food Web Model

e2e_calculate_hrscaleCalculate initial values of the scaling parameters for the...
e2e_compare_obsBox and whisker plots comparing annual or monthly...
e2e_compare_runs_barCreate tornado bar-plots of the differences between two model...
e2e_compare_runs_boxBox and whisker plots comparing annual or monthly outputs...
e2e_copyMake a copy of a named model/variant and documentation in a...
e2e_extract_hrExtract the values of harvest ratios generated by the fleet...
e2e_extract_startExtract the values of all the state variables at the end of a...
e2e_get_parmdocGet documentation on the parameters in the model.
e2e_get_senscritGet documentation on the model outputs available as the basis...
e2e_lsList the available models in a designated workspace.
e2e_merge_sens_mcCombine two or more sets of raw output data from parallel...
e2e_optimize_actOptimize StrathE2E fishing gear activity multipliers to...
e2e_optimize_ecoOptimize StrathE2E ecology model parameters to maximise the...
e2e_optimize_hrOptimize StrathE2E harvest ratio multipliers to maximum the...
e2e_plot_biomassPlot showing the annual annual average biomass densities of...
e2e_plot_catchPlot the distribution and composition of annual catches...
e2e_plot_ecoPlot daily data on ecological outputs from the model over the...
e2e_plot_edriversPlot climatological year of environmental driving data.
e2e_plot_fdriversPlot shaded-grid-cell diagrams of the distributions of...
e2e_plot_migrationPlot daily data on migration fluxes by actively mobile guilds...
e2e_plot_opt_diagnosticsPlot diagnostic data on the performance of parameter...
e2e_plot_sens_mcPlot diagnostic data from sensitivity and Monte Carlo...
e2e_plot_trophicPlot showing the annual mean trophic level index, and the...
e2e_plot_tsPlot ecology model state variables or fishery catches for the...
e2e_plot_ycurvePlot fishery yield curve data for planktivorous or demersal...
e2e_process_sens_mcPost-process already-created data from sensitivity or Monte...
e2e_readRead all the configuration, driving and parameter files for a...
e2e_runRun the StrathE2E model with a given configuration.
e2e_run_mcRun a Monte Carlo simulation with StrathE2E and derive...
e2e_run_sensPerform a parameter sensitivity analysis on the StrathE2E...
e2e_run_ycurveRun a set of models to generate fishery yield curve data for...
StrathE2E2-packageStrathE2E2 Package
StrathE2E2 documentation built on Jan. 23, 2021, 1:07 a.m.